GPGraph¶

Genotype-phenotype maps in NetworkX

from gpmap.simulate import MountFujiSimulation
from gpgraph import GenotypePhenotypeGraph, draw_flattened

# Simulate a genotype-phenotype map
sim = MountFujiSimulation.from_length(4, roughness_width=1)

# Turn the genotype-phenotype map into a networkx object
G = GenotypePhenotypeGraph(gpm)

# Draw the graph
draw_flattened(G, with_labels=False, node_size=100)

_images/readme-fig.png

Contents:

gpgraph package

Indices and tables¶